20Sep11 version files changed by 22Sep11 upgrade:

doc/Manual.pdf
doc/create_sites.html
doc/create_sites.txt
src/app.cpp
src/app.h
src/app_lattice.cpp
src/app_lattice.h
src/create_sites.cpp
src/create_sites.h
src/diag_cluster.cpp
src/domain.cpp
src/domain.h
src/lattice.cpp
src/lattice.h
src/set.cpp
src/version.h